PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091130.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 465aa MW: 53338.9 Da PI: 9.3909

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.7	8.1e-23	220	308	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg++ +k++ ++++r+e rtgC+a+l +k ++ +k+ v +++++HnH ++ XP_028091130.1 220 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFHGVDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFV 308 6******************9.6677************9999.999**************999899***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MAMPKPTVKT SMHSHGFGFD PRANDYKLVR IADFYPTKLP NQKPTTHVEV YYLNAGSWKM 60 SSKGRNSYLD GITIDYSGRF PAYLEGAVHF AAKMKKSNDP LILSFDLCDE VFQTMMLPDG 120 VIALRTEVRA SFTIDLSRGI TQVLGIWNNG HILLETKAPS DWENLILLNK PNDAFSRRRV 180 SRKRTWHIDM EPNNVENDGG DCNWKPRVHM TFDTEQEAYN FYNAYGGRMG FSIRRGYVNK 240 NKEGQITSRL FVCNKEGFHG VDKRDPLTKN PRQEVRTGCQ ARLIIKWDRN IHKFFVGEFV 300 EQHNHIFVPT ECTHMLPSQR KISASQATEI DLAKKSGIQL NAAFELMGNE VGERELLGFT 360 KVDQKNYLRT KRQNSLAYGE AGSILQYFRE KTLENPSFFY SVQETIIFGA ALMYDETADS 420 FIWLFRRFLE VMSSKASKTM FTDQDAAMAK AIPIVMSNTK HRLCT

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MAMPKPTVKT SMHSHGFGFD PRANDYKLVR IADFYPTKLP NQKPTTHVEV YYLNAGSWKM  60
SSKGRNSYLD GITIDYSGRF PAYLEGAVHF AAKMKKSNDP LILSFDLCDE VFQTMMLPDG  120
VIALRTEVRA SFTIDLSRGI TQVLGIWNNG HILLETKAPS DWENLILLNK PNDAFSRRRV  180
SRKRTWHIDM EPNNVENDGG DCNWKPRVHM TFDTEQEAYN FYNAYGGRMG FSIRRGYVNK  240
NKEGQITSRL FVCNKEGFHG VDKRDPLTKN PRQEVRTGCQ ARLIIKWDRN IHKFFVGEFV  300
EQHNHIFVPT ECTHMLPSQR KISASQATEI DLAKKSGIQL NAAFELMGNE VGERELLGFT  360
KVDQKNYLRT KRQNSLAYGE AGSILQYFRE KTLENPSFFY SVQETIIFGA ALMYDETADS  420
FIWLFRRFLE VMSSKASKTM FTDQDAAMAK AIPIVMSNTK HRLCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-42	FAR1 family protein