PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091001.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARF
Protein Properties Length: 822aa    MW: 91977.6 Da    PI: 6.4426
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.55.1e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++
  XP_028091001.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEK 218
                     99*****************************9777666.49************************************************..8889 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+++++r+
  XP_028091001.1 219 NQLLLGIRRA 228
                     999***9986 PP
2Auxin_resp118.84.2e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+ dld+vrWpnS+Wrs+k
  XP_028091001.1 253 AAHAAATNSCFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDSVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 822 aa     Download sequence    
MKLSTSALGQ QTHEGEKKCL NSELWHACAG PLVSLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDAHMPNYPS LPPQLICQLH NVTMHADLET DEVYAQMTLQ PLTPQEQKDT YVPVELGIPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSL QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRAIR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIG DLDSVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWYPG ASSFQDSREG AVNGMTWFRG ETGEQGLQSI NFQNVGMFPW  420
TQQRVDASFV RNDLNQQYQA MLAAGLQNIG GGDSLKQQYL QLQQPFQYLP HPGSQNPLLH  480
QQQQVIQPPN PLHILQAQTQ MLPENLPRHM QQQVCNQPEE QRQQHTYQDA FLIQSDQLQH  540
RQQQPNVPSP SFSKTDFADS NPKFSTSVAP CIQNMLGSLC TEGSGNLFNF SRTGQSMLSE  600
PSQQPWVSKF THSQVNTSAN SALLPPYPGK EAAVEQENCS LDAQNHALFG ANIDSGLLLP  660
TTLSNIGTSS VNAVVSSMPL GASGFQSSLF GMQDSSELLH NAAQVDPSTP TRNTFVKVYK  720
SGSVGRSLDI SRFSSYNELR EELGQMFGIE GLLKDPQRSG WQLVFVDRED DVLLLGDGPW  780
EAFVNNVWYI KILSPEDVLK LGKQEVESFS HNTGERDEYQ WE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein