PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028090416.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 427aa MW: 49565.6 Da PI: 8.2053

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028090416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70	5.7e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsvr+s+++ + +n+ + + ++vCs+eg re++ + e+ r+++aetr C+a+++v+ +k k++vt+++ eHnH+la XP_028090416.1 65 FYNAYAKVIGFSVRRSRKRITGDNKFVESMKWVCSREGVREKKYLQrVERVRTPSAETRLFCNATFRVRYDKtARKYVVTHFVGEHNHPLA 155 ***************************************99888466778899************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDEPESSRPE EVNTEIDDQF APDGKDNVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESMKWVCSR EGVREKKYLQ RVERVRTPSA 120 ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQGQAKAM 180 RNVGMKMSQI MDFMVHQSGG YKKVGFIHRD LHNQFQAEGV LGYLSAKLDA DPLFFFKYNV 240 DKDNRLDKIF WADCRSRMDY AAFGDVLVFD TTYRTNAYKK PFVILAGASN HFMTTIFGCA 300 LLPDETMETY TWVLEMLMEA MDGKRPISVV TDGDRAMRQA IKRVIPNCRH RLCSWHLEKN 360 ASTNVHIPEF TADFAQLMLK KCKIDEFDNA WAAMVKQYKL ENNNWVLDIH LKRDNWAEAY 420 LYGHIAV

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDEPESSRPE EVNTEIDDQF APDGKDNVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESMKWVCSR EGVREKKYLQ RVERVRTPSA  120
ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQGQAKAM  180
RNVGMKMSQI MDFMVHQSGG YKKVGFIHRD LHNQFQAEGV LGYLSAKLDA DPLFFFKYNV  240
DKDNRLDKIF WADCRSRMDY AAFGDVLVFD TTYRTNAYKK PFVILAGASN HFMTTIFGCA  300
LLPDETMETY TWVLEMLMEA MDGKRPISVV TDGDRAMRQA IKRVIPNCRH RLCSWHLEKN  360
ASTNVHIPEF TADFAQLMLK KCKIDEFDNA WAAMVKQYKL ENNNWVLDIH LKRDNWAEAY  420
LYGHIAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-71	FAR1 family protein