PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028090268.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 488aa MW: 53970.7 Da PI: 6.7937

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028090268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.4e-13	342	388	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_028090268.1 342 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 388 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MGEKFWLNEE DKGMVVTVLG TEAFNFLVAS ASGNVLSEFA SSAGDLGVQQ RLCKIVDGSN 60 WTYAILWQVA KSKSGNSALI WGDGHCREPK GSEVEDGNGS GDRKLEAGDG RKRVLQKLHA 120 CFGGSEEDNY VGNLDSVSDV ELFYLTSMYY SFPFDKPSSP SQSFNTGRVI WVSDTKGCSE 180 HYQSRSYLAK LARFETVVFV PLKSGVVEIG SVKSVPEEQS LIQMVKTTFG GSLLQAKVSL 240 PKIFGRELSL GGAKSHPMTI SFSPKVEDDL GFPSESYELR AVGTNQVYGN SSNGCRSDDG 300 EAKLFPHMNG EQAEEDLLIH PDERKARKRG RKPANGREEP LNHVEAERQR REKLNQRFYA 360 LRAVVPNISK MDKASLLGDA ITYITDLQRK IRILEAEKDV GNNKQKQCTV SEIDFQARHE 420 DAVVRVSCPL DTHPVSRVIQ TFREHQVIAQ ESKVSTTDNG EIVHTFSIRT QSGAAEHLKE 480 KLVAALAR

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MGEKFWLNEE DKGMVVTVLG TEAFNFLVAS ASGNVLSEFA SSAGDLGVQQ RLCKIVDGSN  60
WTYAILWQVA KSKSGNSALI WGDGHCREPK GSEVEDGNGS GDRKLEAGDG RKRVLQKLHA  120
CFGGSEEDNY VGNLDSVSDV ELFYLTSMYY SFPFDKPSSP SQSFNTGRVI WVSDTKGCSE  180
HYQSRSYLAK LARFETVVFV PLKSGVVEIG SVKSVPEEQS LIQMVKTTFG GSLLQAKVSL  240
PKIFGRELSL GGAKSHPMTI SFSPKVEDDL GFPSESYELR AVGTNQVYGN SSNGCRSDDG  300
EAKLFPHMNG EQAEEDLLIH PDERKARKRG RKPANGREEP LNHVEAERQR REKLNQRFYA  360
LRAVVPNISK MDKASLLGDA ITYITDLQRK IRILEAEKDV GNNKQKQCTV SEIDFQARHE  420
DAVVRVSCPL DTHPVSRVIQ TFREHQVIAQ ESKVSTTDNG EIVHTFSIRT QSGAAEHLKE  480
KLVAALAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	332	RKARKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-175	bHLH family protein