PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26935.1 Da PI: 10.4799 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 53 | 102 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp ++ +r++lg+f+tae+Aa a+++a+++++g XP_028089818.1 53 HYRGVRQRP-WGKWAAEIRDP----IKaARVWLGTFDTAEGAALAYDEAALRFKG 102 7********.**********7....357************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTAMVSALTQ VIANSDQNPV LLHSNPLVLS QSGIPELNQS QPGQDQGNQK RRHYRGVRQR 60 PWGKWAAEIR DPIKAARVWL GTFDTAEGAA LAYDEAALRF KGNKAKLNFP ERVQGRIELG 120 SLTTTRQNSR VVSKRVSNLV RPPPPPPPRP RPLLSQEPYP NVFHYAQLLG NESNDVNYSN 180 VSGLLYPGGT FVSQSLSSSS SVTSLATSQQ EGQQSEVLRF SEQFGSSDLP RNWGDFDTKH 240 SRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 2e-36 | ERF family protein |