PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28259.8 Da PI: 4.9534 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 73 | 123 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVrw+ + Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a+ +l++ XP_028089775.1 73 PVYRGVRWRN-AHTWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRN 123 68*******9.8******9998...347************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDSSKKNVFS HYSDTLPSGS GFSSKEVAEC SSASDRGTGA HPAAICSDDE LLLASRNPKK 60 RGGRKKVKET RHPVYRGVRW RNAHTWVCEV REPNKKSRIW LGTFPTAEMA ARAHDVAAIA 120 LRNRMACVNF ADSVWRLPVP ASLDPKDIQK AAAEAAEMFR PPLLEEKKDV PGDVAKPEED 180 ATLTTTATTT ATETATETTM PENLLFMDDE AIFGMPGLLA NMAEGLMLPP PPPHSEGGDW 240 YEGDDAELGD DVSLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 3e-67 | ERF family protein |