PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 337aa MW: 38034.4 Da PI: 10.4178 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.6 | 9.5e-32 | 270 | 327 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ XP_028089628.1 270 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCLDDPSMLIVTYEGEHNHS 327 9*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MEVVEEANKS AVESCHRVLT LLCHSQDQVQ NKTLMVEAVF KFKRVVSLLS GSLGHGRVRK 60 LKKFKPSLPQ NIFLESPNHQ TNFPKPLQLL PTSFPENPIP ETDSKPGNSL QFSQKIFLEK 120 QNFLTRPSQR HQFLQQQMMQ RLHLHQQQQM KFHADMAYAR SNNSGINIKF DGCSSAQTMS 180 SNRSFISSLS MDGSAASLNG NSFHLIGVPQ TSDQTSQQSR KRCSCRGEDG TVTKCVSSGK 240 CHCSKRRKLR VKRSIKVPAI SNKVADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSSVRGC 300 PARKHVERCL DDPSMLIVTY EGEHNHSRLV LSQSAHT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.1 | 1e-116 | WRKY family protein |