PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089587.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 25648.3 Da PI: 9.1423 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.9 | 2.2e-25 | 25 | 114 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn Y+ ++GF++r+++s+k+k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+ +l +k ++ +gk++vt+++++HnH+l+ XP_028089587.1 25 DFYNIYGGRMGFNIRRDYSRKNKFTNQLICRLLVCNKEGFRKVDKRD-PLAKNPRAETRTGCETRLYIKSDEsTGKFVVTDFKEKHNHDLV 114 6*******************************************999.999*******************999****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MELENDCAWK PKQGMTFDSK QCAYDFYNIY GGRMGFNIRR DYSRKNKFTN QLICRLLVCN 60 KEGFRKVDKR DPLAKNPRAE TRTGCETRLY IKSDESTGKF VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQAIELELAA QSGLRLGQYF ELMSREAGGK QCLGYTKLDQ KIYLRTKRQQ 180 SLTYGEVGNV LQYFKEKSLQ NPSIFYVFQL DNEEQIINML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-34 | FAR1 family protein |