PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089465.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 307aa MW: 34434.7 Da PI: 7.15

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106	1.9e-33	158	215	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+a+C+vkk+ver+ +dp++v++tYeg+H h+ XP_028089465.1 158 EDGYRWRKYGQKAVKNSPFPRSYYRCTTATCNVKKRVERCFNDPSIVVTTYEGKHAHP 215 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MERKQAVKIE DSIQHFPFSD YYPASTPLSS MLDFSSEAER SSFGFMDLLG IQDFSPSSIF 60 DTPFVEQQIQ SSSAPPLADS SSEVLNNQPM TPNSSTISSE SSGAPSGEQS KPNDDDDDKE 120 EKHQKTKKQL KARKMCEKKK QREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPFPRSY 180 YRCTTATCNV KKRVERCFND PSIVVTTYEG KHAHPSPIML RQTSSAATGL PPPPPPPPPP 240 CPGFSANAAT FAPPLQPMQV PFLSHQSQFR NLAHQMNLGY LNYINPKCET DYALLQDIVP 300 SLVTKEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	6e-52	WRKY family protein