PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089462.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 421aa MW: 47327.6 Da PI: 4.3114

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.5	2.9e-17	106	155	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s ykGVr++k +g+++AeIrdp +r kr++lg++ taeeA a+++ ++++e XP_028089462.1 106 SLYKGVRRRK-WGKYAAEIRDP----IRgKRIWLGTYNTAEEASNAYEKKKLEFE 155 57***998.******7....246******************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MPVVQRKLLN HNKKMEEKTG KDYKKSIRKV RIIYSDPYAT DSGSDDDESI YDNKNGLVRV 60 KWIVREIVVS GEPNKLNAAN SLQHCNERRI VGSKLGEKQK IRRSSSLYKG VRRRKWGKYA 120 AEIRDPIRGK RIWLGTYNTA EEASNAYEKK KLEFESILLS ERNKNLNLCV ASPMCHPCVS 180 EETNGLYSHP SPSSVLDIST TSVVNGSGNF NKDEGGSLKF VDAPAYSIKE EEANTIQIAK 240 GEQPISAFLE DQFVSPSIDQ DFDLGFEENL LPTNDLEQKP NLEILQDPAV SPSMSRELDL 300 AFENNSLYDD DQSVSPLICQ DFNLGFEDLE QPPPISEFLQ EPSVSPSING DLSSVFENNS 360 LYGNDLGQFF NSLDNADMDM DMDFPVCEFQ NGEGNDLPNY DFDLGNDELA WIDEALNITC 420 P

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MPVVQRKLLN HNKKMEEKTG KDYKKSIRKV RIIYSDPYAT DSGSDDDESI YDNKNGLVRV  60
KWIVREIVVS GEPNKLNAAN SLQHCNERRI VGSKLGEKQK IRRSSSLYKG VRRRKWGKYA  120
AEIRDPIRGK RIWLGTYNTA EEASNAYEKK KLEFESILLS ERNKNLNLCV ASPMCHPCVS  180
EETNGLYSHP SPSSVLDIST TSVVNGSGNF NKDEGGSLKF VDAPAYSIKE EEANTIQIAK  240
GEQPISAFLE DQFVSPSIDQ DFDLGFEENL LPTNDLEQKP NLEILQDPAV SPSMSRELDL  300
AFENNSLYDD DQSVSPLICQ DFNLGFEDLE QPPPISEFLQ EPSVSPSING DLSSVFENNS  360
LYGNDLGQFF NSLDNADMDM DMDFPVCEFQ NGEGNDLPNY DFDLGNDELA WIDEALNITC  420
P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	115	KGVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	7e-25	ERF family protein