PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22941.5 Da PI: 4.8946 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 9.7e-18 | 39 | 88 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg++ ae+Aa+a++ a+++++g+ XP_028089436.1 39 YRGVRLRT-WGKWVSEIREPRK---KSRIWLGTYPKAEMAARAHDVAALAIRGH 88 9****998.**********843...6*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MDSKPLTNEG SKTAKQPVNK TSTKEQDKRV ITGKHHRTYR GVRLRTWGKW VSEIREPRKK 60 SRIWLGTYPK AEMAARAHDV AALAIRGHSV TLNFPELAHK LPRPATTAPK DIQAAAALAA 120 SGEFDEPEKM DSEDQPSQHD DDQITMSQEL GTCQESEDGD DDTLFDLPDL LLDSMDRSLE 180 FSYASWFEVG FQFEEPFLWD YN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-47 | ERF family protein |