PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088709.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 269aa    MW: 30220.7 Da    PI: 7.1873
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.86.3e-34602001128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+P+d+e++ ++L++kv+++ ++++        +i+   +i++++P++Lp  v++  +  +fF++ +k+y+tg+rk+r+++      + 
  XP_028088709.1  60 LPAGVKFDPSDQEIL-QHLEAKVSSNAHKIHPlidefipTIEGGnGICYTHPEKLPG-VSKVGQIRHFFHRPSKAYTTGTRKRRKVHtdedggET 152
                     799***********9.99*******995553333343322444445**********4.44445677******************74445665577 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v++ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_028088709.1 153 RWHKTGKTRPVFV-GGTVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 200
                     8************.99************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MTWHNDSEDE RAIQIVSPSP QQNGVINEEE AGEVRFITCP SCAHNIQLQN RAGIEDLPGL  60
PAGVKFDPSD QEILQHLEAK VSSNAHKIHP LIDEFIPTIE GGNGICYTHP EKLPGVSKVG  120
QIRHFFHRPS KAYTTGTRKR RKVHTDEDGG ETRWHKTGKT RPVFVGGTVK GFKKILVLYT  180
NYGRQRKPEK TNWVMHQYHL GNNEEERDGE VVVSKVFYQT QPRQCGSTSS LADSVFDQKS  240
SHVIENTQGY VEGYYNTTAL ISYDIGFGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-121NAC family protein