PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088616.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 429aa MW: 46503.7 Da PI: 9.5763

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9.2e-05	189	211	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +CpdCg+ F +++L+ H+ + H XP_028088616.1 189 SCPDCGEIFMKPESLELHQGVrH 211 8*****************96655 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MAKTKTPAKP IKKNQPHNAP KSQKPPSWSV VRSLLTCKHL QTQPQEKEKQ EKQQKQQKQE 60 RPTEESSKKC KKMKCSGSLC SNTKVMHRPE PPSSSTSEDN NKNRASMGGS NSINNHTGSS 120 SRSMKAPLSE LNGASFSASS NSSSSASTVV GSFRGIPFRR LSGCYECRMV VDPVLGFTRD 180 PSLRASICSC PDCGEIFMKP ESLELHQGVR HAVSELGPED TSKNIVEIIF QSSWLRKQSS 240 SSSSPICKID RILKVRNTPK TLSNFQQYRD TIKSKSTKLP KKHPCCIADG NELLRFHSTT 300 FVCSLGLNSS SNLCNSIPNC SVCSIIKNGF KLPNDAGKGI LTTATSGKAH DSAAAAEEDG 360 GGDRRAMLVC RVIAGTVRKN GEGGGGDGEV VEEYDSVAGA AGVYSNLDEL YVFNPRAILP 420 CFVVIYRGF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MAKTKTPAKP IKKNQPHNAP KSQKPPSWSV VRSLLTCKHL QTQPQEKEKQ EKQQKQQKQE  60
RPTEESSKKC KKMKCSGSLC SNTKVMHRPE PPSSSTSEDN NKNRASMGGS NSINNHTGSS  120
SRSMKAPLSE LNGASFSASS NSSSSASTVV GSFRGIPFRR LSGCYECRMV VDPVLGFTRD  180
PSLRASICSC PDCGEIFMKP ESLELHQGVR HAVSELGPED TSKNIVEIIF QSSWLRKQSS  240
SSSSPICKID RILKVRNTPK TLSNFQQYRD TIKSKSTKLP KKHPCCIADG NELLRFHSTT  300
FVCSLGLNSS SNLCNSIPNC SVCSIIKNGF KLPNDAGKGI LTTATSGKAH DSAAAAEEDG  360
GGDRRAMLVC RVIAGTVRKN GEGGGGDGEV VEEYDSVAGA AGVYSNLDEL YVFNPRAILP  420
CFVVIYRGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	3e-75	C2H2 family protein