PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028088337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21526.3 Da PI: 9.4036 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.8 | 2e-16 | 70 | 118 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 s ykGVr++k +g+W+AeIrdp + r +lg+f tae+A++ + a + +l XP_028088337.1 70 SPYKGVRQRK-WGKWAAEIRDPI----NkIRLWLGTFNTAEKAYEVYLAKKIEL 118 68*******9.**********72....34******************9998887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 197 aa Download sequence |
MRKLRVICSD PDATDCSSDE EHGVRVDKKR IIHQIDLEDV VPSEGTTTQK NPPKKKKRAS 60 IQSSKSNSKS PYKGVRQRKW GKWAAEIRDP INKIRLWLGT FNTAEKAYEV YLAKKIELDE 120 KKARIAAISK GLNGVELVVS PSSVLAKDGP VSPNDGGTET SADAESGGLG SQIIDKNGFL 180 LGEFSSLDDM RISDANG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68550.1 | 1e-24 | ERF family protein |