PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 370aa MW: 40814.9 Da PI: 4.3808 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 117 | 166 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+y+GVr++k +g+W+AeIrd + + kr++lg++ taee a+a++ ++++e XP_028088326.1 117 SKYRGVRQRK-WGKWAAEIRDpF-----TgKRVWLGTYNTAEEGARAYDLKKLEFE 166 89*******9.**********55.....45********************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence |
MPDPRSQPPS NQNHICKKSK KKSVSSEENT QKMKKIRVIF SDPYATESSD DERNENQYAP 60 KRIVREINIP LGVVNQPKVL ETESSCQSNS NGEKAPPKKN RVLTKTLNAN RARPSGSKYR 120 GVRQRKWGKW AAEIRDPFTG KRVWLGTYNT AEEGARAYDL KKLEFESMAA SSERSYNHNQ 180 NHSSSVAEDS ESLLSHTSPL SVLQLDSLAS ASASNSHVDV ELNVTLTDFG VDHTIVADGQ 240 KMPNAVLELD SVASASDSHD DGKSNGNDFG VDTIVDDQKM PNAVAVDDEP LVSQIGEGLD 300 IGMELDSLFA DDFDNLDNLL CDFGSLDDLQ IGGFEDDQPS DLPEFEFDFE FGKEELAWID 360 EVGPLNIACP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-28 | ERF family protein |