PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 24402.5 Da PI: 4.9127 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.6 | 7.4e-17 | 6 | 93 | 2 | 88 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + G++F Ptd+el+ +yL++k++g++l++e ++e+++y+ ++L k k+++++k +y+F++ +kk+ +gkr ++ +g+Wk + XP_028088315.1 6 TIGYKFIPTDKELILHYLRAKAKGQPLPVEGLVNECNLYDD--QELLKifsKMRTKSKLYYYFTELKKKNGKGKRIDHMVGKGTWKGLDR 93 57***************************999*****9975..34432234888888888**************************6554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MAANITIGYK FIPTDKELIL HYLRAKAKGQ PLPVEGLVNE CNLYDDQELL KIFSKMRTKS 60 KLYYYFTELK KKNGKGKRID HMVGKGTWKG LDRVRTDEYR PVTACVTDKN YVLCVIKRKR 120 RRVEIEQQEQ PVDDSDIDHY FIEQEEPTAA VIQQELAPTD DDDHFDWDQF VWDSTLTATP 180 VIQPEKQPTT AFIQQELAEA DDNGHFDWD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 122 | KRKRRR |
2 | 118 | 122 | RKRRR |
3 | 119 | 123 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.1 | 4e-16 | NAC family protein |