PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 24639.4 Da PI: 6.0376 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.8 | 7e-10 | 22 | 65 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT Ed+ + da +++ + +W++Ia ++ g+++++++ ++ XP_028088296.1 22 TWTRHEDKVFEDALVLFPEEvadRWEKIADQIP-GKSPEEVRAHY 65 7*****************99*************.**********9 PP | |||||||
2 | Myb_DNA-binding | 47.8 | 3.2e-15 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + +G+g+W++I+r m +Rt+ q+ s+ qk+ XP_028088296.1 122 PWTEEEHRLFLVGLQTYGKGDWRSISRNMVVTRTPTQVASHAQKF 166 8******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MFGDPNDYQW SMNCNSSAIP STWTRHEDKV FEDALVLFPE EVADRWEKIA DQIPGKSPEE 60 VRAHYEALVH DVNEIESGRV ELPSYSDESS LGWETESKAS QISFGSAAKT KHGEVERKKG 120 TPWTEEEHRL FLVGLQTYGK GDWRSISRNM VVTRTPTQVA SHAQKFFLRQ NLVKKDRKRS 180 SIHDITTAPD IHPIPLSSHF PDQGGSMGYQ NFNYPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-77 | MYB family protein |