PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088140.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 413aa    MW: 45377.4 Da    PI: 7.0363
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.5e-12204247855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++     +K +K++i+ +Av +IksLq
  XP_028088140.1 204 TERERRKKMRNMFSKLHALLPHL----PPKADKSTIVDEAVTHIKSLQ 247
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MESPVWNWQK KVKKGFDIPG ETKEHGFGIL IVAFDIGNEV FREISLPNYQ PDGRLHTNTA  60
VTVLGESLAV LGESKLHKSS SRFDSINRSG TPIPPADGFP EGIRLVATMS DLGGGHENFF  120
WETQSCAFSN SDGLGCIGEK SGEKPPPDSR FNTQTPTGKE VEEVIAVAPG MKQGGVGNNG  180
KGRGGEANEG KGGGESDHEI HIWTERERRK KMRNMFSKLH ALLPHLPPKA DKSTIVDEAV  240
THIKSLQQNL QKLQRQKLER LHGLTPMNFD GQSSIITPQK LPIDSREAFM ADQVSSNNTN  300
SNSSNALPVS LSRFPPLFQT WTSSNVILNV CGDHAQISVC SMKKAGLFTA ICYVLEKHKL  360
DVVFAHVSSD QNRTMYMIQA HARIAPDQLP EAFPVEEIYK QAAGEIMVWV LAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-33bHLH family protein