PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088063.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 404aa MW: 46715.8 Da PI: 5.7458

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.9	4.1e-24	58	148	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn Y+ +vGFs+rk++ +k+++++eit+rtfvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028088063.1 58 DFYNMYGGKVGFSIRKAYANKNRQTKEITSRTFVCYKEGSRGIDKRD-LLVKNPRQEIRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 148 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEEQRDGESG GDAMRCDAMA KRPHCGDSEV MEENNIVDDC GWKSKVGMPF DSEQAAYDFY 60 NMYGGKVGFS IRKAYANKNR QTKEITSRTF VCYKEGSRGI DKRDLLVKNP RQEIRCGCGA 120 RFSIKLDRIS GKYIACDFVE HHNHDLVPQD CIHILPSQRK ISTTQAIEVE LASQSGIPLR 180 SAYELFSRES GGKASLDFTK LDQKNYLRSK RQKDLEYGEA VQLDCEEQIS NIFWADAQMI 240 MDYAQFGDVV TFDITYKLNN EHRPFGSFVG FNHHRETIIF GATLMYDETT ESFTWLFQIF 300 LEAMLNKAPK TIFTDQDAAM SKAILIVMPD TNHRLCTWHL MQNVVKHVSF VFDDVGVKAV 360 FSKFMHDIDD EEEFRIQWDQ MLDKYDACDN HWLEQTFHVK KKWG

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEEQRDGESG GDAMRCDAMA KRPHCGDSEV MEENNIVDDC GWKSKVGMPF DSEQAAYDFY  60
NMYGGKVGFS IRKAYANKNR QTKEITSRTF VCYKEGSRGI DKRDLLVKNP RQEIRCGCGA  120
RFSIKLDRIS GKYIACDFVE HHNHDLVPQD CIHILPSQRK ISTTQAIEVE LASQSGIPLR  180
SAYELFSRES GGKASLDFTK LDQKNYLRSK RQKDLEYGEA VQLDCEEQIS NIFWADAQMI  240
MDYAQFGDVV TFDITYKLNN EHRPFGSFVG FNHHRETIIF GATLMYDETT ESFTWLFQIF  300
LEAMLNKAPK TIFTDQDAAM SKAILIVMPD TNHRLCTWHL MQNVVKHVSF VFDDVGVKAV  360
FSKFMHDIDD EEEFRIQWDQ MLDKYDACDN HWLEQTFHVK KKWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-79	FAR1 family protein