PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088031.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NZZ/SPL
Protein Properties Length: 309aa    MW: 33376.2 Da    PI: 8.3521
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE445.4e-142117536185
          NOZZLE  36 rte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeek..kklvvatvgd..tssvaaisntatrlpvpvd.rgvvlqgfpsslgssri 124
                     r+e tk+s  rk  s+ +  k+kk   rgmgva+ler +++++   kk++ +t  +    s+      ++ +p p+  +g+   g+  +l  +ri
  XP_028088031.1  21 RSEnTKQSGRRKSKSNESVPKKKKQPQRGMGVAQLERLRLQDQDrwKKITQTTTTNplPQSLNPFFPPSSSFPNPISsNGLAQLGLNQALMRQRI 115
                     77857777778999999999999999*************98775124554333333113445555557899****962688888**********9 PP

          NOZZLE 125 lcggvgsgqvmidpvispwgfvetsatthelssisnpqmynass.nnrcdtcfkkkrldgdq 185
                       g   sg           g+      + elssi+n + yn  s +++c  c kkkr++g++
  XP_028088031.1 116 RNGC-FSGTDSYGFGGLNLGLQSGFN-VEELSSIPNLRSYNYYSdDQHCGLCHKKKRVNGEN 175
                     8765.566655555556677665555.89************8661568************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MATSVLMASE KNLAELEDFS RSENTKQSGR RKSKSNESVP KKKKQPQRGM GVAQLERLRL  60
QDQDRWKKIT QTTTTNPLPQ SLNPFFPPSS SFPNPISSNG LAQLGLNQAL MRQRIRNGCF  120
SGTDSYGFGG LNLGLQSGFN VEELSSIPNL RSYNYYSDDQ HCGLCHKKKR VNGENFGLCP  180
PINGCDFLGL NLRNKRIVDG ENQDLGMGAL GYGGGNVDQE VEVVAVHRKG SSGGGGGNVF  240
MEFEFFPGKD GVRGTSSKDY MDLTGGSSSS EASVVVAADQ GSCFTAPTTT FTGFDSSSTS  300
VDLSLKLSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13044RRKSKSNESVPKKKK