PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087923.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 405aa MW: 45866.1 Da PI: 4.575

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.2	9.6e-21	58	176	1	128
NAM 1 lppGfrFhPtdeelvveyLkkk.vegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+G++F+P+d+e++++ L+k v++ k ++++ ++e +i++++P++Lp + +++++ + +g+ + +W++tg+ XP_028087923.1 58 LPKGVKFDPSDQEIIWHLLAKAgVDNMKphpfIDEFILtVDEDdGICYTHPQNLP-----G-------TRKRR-KIHGDD----FGDVRWHKTGR 135 799**********998888734444466553443333444435*****9.....2.......12233.333333....44568** PP NAM 89 dkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +k+v+ +g ++g+kk++v+y r k+ekt+Wvmh+y++ XP_028087923.1 136 TKPVIL-DGVQTGCKKIMVLYvsPVRGGKAEKTNWVMHQYHF 176 **.99********6545888889*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MAGQSWLVDS NRIATKIRSA SGLGDPARVN WKSNPSRPCP NCQHIIDNSD VTQEWPGLPK 60 GVKFDPSDQE IIWHLLAKAG VDNMKPHPFI DEFILTVDED DGICYTHPQN LPGTRKRRKI 120 HGDDFGDVRW HKTGRTKPVI LDGVQTGCKK IMVLYVSPVR GGKAEKTNWV MHQYHFGTGE 180 DEKEGEYVIS KVFYQQQQVV KLNEIFQQDF PEGTDSMIAK VDPVTPQSAT PEPPRIDRRF 240 SDVDPIQQPT VTCIEPNAQL QHHEMWHVED EVQAANEKSE CQDSLMVENN DNQNGHDPKW 300 WDSESQNLLD SQQLVEALSL CDELLRSQSP YRDGNENEEL KGKPCLSDYA HLGPEFLKKD 360 LEACQDLVLD PANIELDTPP DFRLSQLEFG SQESFLAWGG SNVVE

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MAGQSWLVDS NRIATKIRSA SGLGDPARVN WKSNPSRPCP NCQHIIDNSD VTQEWPGLPK  60
GVKFDPSDQE IIWHLLAKAG VDNMKPHPFI DEFILTVDED DGICYTHPQN LPGTRKRRKI  120
HGDDFGDVRW HKTGRTKPVI LDGVQTGCKK IMVLYVSPVR GGKAEKTNWV MHQYHFGTGE  180
DEKEGEYVIS KVFYQQQQVV KLNEIFQQDF PEGTDSMIAK VDPVTPQSAT PEPPRIDRRF  240
SDVDPIQQPT VTCIEPNAQL QHHEMWHVED EVQAANEKSE CQDSLMVENN DNQNGHDPKW  300
WDSESQNLLD SQQLVEALSL CDELLRSQSP YRDGNENEEL KGKPCLSDYA HLGPEFLKKD  360
LEACQDLVLD PANIELDTPP DFRLSQLEFG SQESFLAWGG SNVVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-168	NAC family protein