PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028087617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24283 Da PI: 9.8913 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.5 | 1.1e-20 | 18 | 69 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++ a+++++g+ XP_028087617.1 18 TRYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAAREFRGA 69 68********.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MAPRDKTATI AAVNGKETRY RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD 60 TAAREFRGAK AKTNFPTPSE LVLTAAAANN SNKITVVNTT RSPSQSSTVE SSSYAPPIAA 120 VPLPPPSLDL NLSHLGGAGA HFSGVFPTAR PIFFFDALSR SETLNNHLNM YRFDRKVPNF 180 HPTVAGGVQS DSDSSSVVDN NDADRSPSSK FLHGLDLNLP PPEDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 3e-26 | ERF family protein |