PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087602.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 453aa MW: 52827.4 Da PI: 5.9716

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	63	133	1	71
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 +fYn+Y++++GFs+rks+ +k+k+++e t+ tfvCske ++ +k++ + +++ r +C +l +++ XP_028087602.1 63 EFYNNYGEKMGFSIRKSYAHKNKQTKELTSWTFVCSKERSQGIDKRDPLVKFPRQELVRQECIHMLSSQRK 133 6******************************************9999777777888899999888776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MAERGDDGYG EGWRMTKGGD STARRYHGDD EVMEENNVVD ELGSCGWKPK LGMPFDYEQA 60 AYEFYNNYGE KMGFSIRKSY AHKNKQTKEL TSWTFVCSKE RSQGIDKRDP LVKFPRQELV 120 RQECIHMLSS QRKISTTQAI EVELASESEI LLRSAYELLG KESGGRASLG FTKLDQKNYL 180 RSKRQKDLEY GEAGSVLQHF RKKTMENPSF YYAVQLDCEE QITNIFWANA QMIMDYAQFG 240 DVVTFDTTYK LNNEHRPFGT FVGFNHHRET VIFSAALIDV GVKGVFSKFM HEIDNEEEFK 300 IQWDQMLDTY DAHNNHWLKQ TFGVKDKWGW PYIMNSWAAG MSTTQLSESF NACLKDYINY 360 DHNLMEFFTH FERVLYDKRY KELEAEYNLS QKLPRVSIPT LMLKQMADIY TKTIFEEFQN 420 EYVQSIKASI VGTRNDGEST IFTIQTTVDG KKR

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MAERGDDGYG EGWRMTKGGD STARRYHGDD EVMEENNVVD ELGSCGWKPK LGMPFDYEQA  60
AYEFYNNYGE KMGFSIRKSY AHKNKQTKEL TSWTFVCSKE RSQGIDKRDP LVKFPRQELV  120
RQECIHMLSS QRKISTTQAI EVELASESEI LLRSAYELLG KESGGRASLG FTKLDQKNYL  180
RSKRQKDLEY GEAGSVLQHF RKKTMENPSF YYAVQLDCEE QITNIFWANA QMIMDYAQFG  240
DVVTFDTTYK LNNEHRPFGT FVGFNHHRET VIFSAALIDV GVKGVFSKFM HEIDNEEEFK  300
IQWDQMLDTY DAHNNHWLKQ TFGVKDKWGW PYIMNSWAAG MSTTQLSESF NACLKDYINY  360
DHNLMEFFTH FERVLYDKRY KELEAEYNLS QKLPRVSIPT LMLKQMADIY TKTIFEEFQN  420
EYVQSIKASI VGTRNDGEST IFTIQTTVDG KKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-41	FAR1 family protein