PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028087491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27790.4 Da PI: 5.5111 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.7e-19 | 129 | 178 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrd + r +r++lg+f ta+eAa+a+++a+ +++g XP_028087491.1 129 LYRGVRQRP-WGKWAAEIRDpW-----RaARVWLGTFHTAKEAARAYDKAAVEFRG 178 59*******.**********88.....77***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDPDQIQKLF QDLQTEEIQA DNPFPPLYLT QDQEFFIMVS AIKHVISGAN LEPIRPSTSS 60 SLASSSGTKA EQTVISLPEA DTCPVCKING CLGCEFFTLT TSTSGTTDTT DVVAGAEGEK 120 KKKRREKKLY RGVRQRPWGK WAAEIRDPWR AARVWLGTFH TAKEAARAYD KAAVEFRGAK 180 AKTNFALSDY QYELDRALER SNARDKAKMK SKVEGTCGET VAASNEANEF WAGIMEDSEL 240 RDLLMMEFP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 129 | EKKKKRREKKL |
2 | 120 | 125 | KKKKRR |
3 | 120 | 128 | KKKKRREKK |
4 | 121 | 126 | KKKKRR |
5 | 121 | 128 | KKKRREKK |
6 | 122 | 127 | KKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 5e-30 | ERF family protein |