PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087422.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 358aa    MW: 40202.8 Da    PI: 4.7038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-20117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp++   r r +lg+++taeeAa+ ++ a+ kl+g
  XP_028087422.1 117 KFRGVRQRP-WGKWAAEIRDPVK---RVRLWLGTYDTAEEAARVYDDAAIKLRG 166
                     89*******.**********755...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDQSMSWPTK YTEHRTVSKK FTKPPKKPSD SRKVPEHNSS GTPRLVLISV TDPNATDSSS  60
DEEDELFSRQ RVKRYVNEIQ IETVCKNSLI IKKNIPANRK TMKKPVCCGA GGGGVRKFRG  120
VRQRPWGKWA AEIRDPVKRV RLWLGTYDTA EEAARVYDDA AIKLRGPDAL TNFTSPLAKE  180
SPEINMTSVS GYESGDESHS RSHSHSLSSP TSVLRSFRTN DEEAELKNRS KPGPVHQDIK  240
GAYNFLLDIV NEPVHEPDPC PPPVQEVEEC QGETNFPEIA DYLPMDIPFL DDFFNFESPE  300
PINFDDSPVL PDNLLSSNNS EMFIDSVHDS ESSSLWEVDD LFEDLGGDFL ISDPLMAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11927KKFTKPPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-38ERF family protein