PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028087326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 24683.4 Da PI: 7.878 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++g+lye+s+ XP_028087326.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPKGRLYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 73.1 | 8.1e-25 | 78 | 173 | 4 | 99 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 sg++ +e++ ++l++e+ + ++ie ++ ++R+llG++Les+ ++eLq +e+qLeksl +iR++K+ l++e+ie+l++ ek l een++Lr+k XP_028087326.1 78 GSGRKEAEENLQHLKEEAVSMSQKIELIEASKRKLLGDCLESCCINELQLIEEQLEKSLHNIRARKTLLYKEKIEQLKEEEKILTEENQKLREKC 172 456668999************************************************************************************97 PP K-box 99 e 99 e XP_028087326.1 173 E 173 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP KGRLYEFSNS 60 SISKTIERYQ RNTKEQDGSG RKEAEENLQH LKEEAVSMSQ KIELIEASKR KLLGDCLESC 120 CINELQLIEE QLEKSLHNIR ARKTLLYKEK IEQLKEEEKI LTEENQKLRE KCEVRSPHLP 180 IPLLVAPEPN REFSDVETEL FIGLPEQRTT HSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-61 | MIKC_MADS family protein |