PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028087325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 25055.8 Da PI: 8.122 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 8.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++g+lye+s+ XP_028087325.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPKGRLYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 73.1 | 7.9e-25 | 81 | 176 | 4 | 99 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 sg++ +e++ ++l++e+ + ++ie ++ ++R+llG++Les+ ++eLq +e+qLeksl +iR++K+ l++e+ie+l++ ek l een++Lr+k XP_028087325.1 81 GSGRKEAEENLQHLKEEAVSMSQKIELIEASKRKLLGDCLESCCINELQLIEEQLEKSLHNIRARKTLLYKEKIEQLKEEEKILTEENQKLREKC 175 456668999************************************************************************************97 PP K-box 99 e 99 e XP_028087325.1 176 E 176 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP KGRLYEFSNS 60 RCLSISKTIE RYQRNTKEQD GSGRKEAEEN LQHLKEEAVS MSQKIELIEA SKRKLLGDCL 120 ESCCINELQL IEEQLEKSLH NIRARKTLLY KEKIEQLKEE EKILTEENQK LREKCEVRSP 180 HLPIPLLVAP EPNREFSDVE TELFIGLPEQ RTTHSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-59 | MIKC_MADS family protein |