PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087230.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 662aa MW: 76205.2 Da PI: 8.4397

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.7	2.5e-20	68	161	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rk + +++ ++g++++r + Cs+eg+r + + tek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028087230.1 68 FYNAYAKAKGFSIRKFRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvTEKSRAPKALTRVGCKAQFRIRYDAnageGGKYVVTHFVADHNHELA 161 9**************9998.666699999*****99877777899999***********9987667789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MNESRVEPYH GCDAGPSNEE ATNMNVEDGG ANVKKEMVDD AHGNDMVGDV ERAILEQKFD 60 SVEDGEAFYN AYAKAKGFSI RKFRFNTNKE GKVVSRLWLC SREGQRLPIY LDRVTEKSRA 120 PKALTRVGCK AQFRIRYDAN AGEGGKYVVT HFVADHNHEL AEQHCVIYLR SHRSLNTADK 180 AQAMAMRNVG VKTSQIMDYM VNQSGSYKNV GFVRTDLHNH IQAERRAEVE DGDEQGALVY 240 LCAKLDVDAR FFYKYDMGIR RCKKQSEEYF QTQDIDYVIG ILGKNVVSNV HISGFAHVFK 300 QRMDMETNKT KFEHGWTTMV KKFGLQTNSW VLETYEKRHM WAEAYMRGHF FAGMKSTQRS 360 ECMNAYFNPF LQHKLKLYEF VRHYDRALAR IRMFRDEILE MGKLNVKDVF PLPNGQKYYY 420 IHKYKVKDRS WIVTHNPVDA AMRCSYMKFE SLGLPCCHMI CVMKVENLTQ IPPTCVLHRW 480 TRAASKDGQQ WPQPSIDSTT TQTTRYGILS SSYNEMCFYA SQSTEGFKEA RDACLPMTSR 540 MKELYERKLN DGNGDKGKHS FPRQFGVKDP DVVRFSRTVG TNSDVDTPHI IDREYNTESL 600 PVRCKTGLVD PSTPHIKQRR LFFDVSSDSK QLVGQYGSVE AAVWKNDSNT IDEVNQVDST 660 SY

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MNESRVEPYH GCDAGPSNEE ATNMNVEDGG ANVKKEMVDD AHGNDMVGDV ERAILEQKFD  60
SVEDGEAFYN AYAKAKGFSI RKFRFNTNKE GKVVSRLWLC SREGQRLPIY LDRVTEKSRA  120
PKALTRVGCK AQFRIRYDAN AGEGGKYVVT HFVADHNHEL AEQHCVIYLR SHRSLNTADK  180
AQAMAMRNVG VKTSQIMDYM VNQSGSYKNV GFVRTDLHNH IQAERRAEVE DGDEQGALVY  240
LCAKLDVDAR FFYKYDMGIR RCKKQSEEYF QTQDIDYVIG ILGKNVVSNV HISGFAHVFK  300
QRMDMETNKT KFEHGWTTMV KKFGLQTNSW VLETYEKRHM WAEAYMRGHF FAGMKSTQRS  360
ECMNAYFNPF LQHKLKLYEF VRHYDRALAR IRMFRDEILE MGKLNVKDVF PLPNGQKYYY  420
IHKYKVKDRS WIVTHNPVDA AMRCSYMKFE SLGLPCCHMI CVMKVENLTQ IPPTCVLHRW  480
TRAASKDGQQ WPQPSIDSTT TQTTRYGILS SSYNEMCFYA SQSTEGFKEA RDACLPMTSR  540
MKELYERKLN DGNGDKGKHS FPRQFGVKDP DVVRFSRTVG TNSDVDTPHI IDREYNTESL  600
PVRCKTGLVD PSTPHIKQRR LFFDVSSDSK QLVGQYGSVE AAVWKNDSNT IDEVNQVDST  660
SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-23	FAR1 family protein