PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087137.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 282aa    MW: 30682.8 Da    PI: 6.5091
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS62.96.4e-20197278287
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87 
                      +lLl+cAeav+++++e+a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y++lp+ + s    ++ +aa+++f+ +
  XP_028087137.1 197 LTLLLKCAEAVAADNFEEARKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVNSCLGIYATLPTIPHS----QKMVAAFQVFNGI 278
                     579************************************************************999996....6777888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDAAASTAW IDGIIKDLIH SSSHVSLPQL IQNVREIIHP CNPNLAALLE YRLRSLTEAP  60
TIPSYPERRK EAAPPIPPLL NSSCQLSNSS TPHPMNQYSN WGQPLPSPPI ATTSAAVVSQ  120
GNAQLLRNNP ASPNSITPII SNQVEQPSQE KPHQDSPTAE HSTPPPPPPA STAIVAREKK  180
EEMRRQQKRD EEGLHLLTLL LKCAEAVAAD NFEEARKMLL EISELSTPFG TSAQRVAAYF  240
SEAMSARLVN SCLGIYATLP TIPHSQKMVA AFQVFNGISL NL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.13e-42GRAS family protein