PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087091.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 274aa    MW: 30851.8 Da    PI: 5.2093
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.67.4e-07641174790
            FAR1  47 k......tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 
                     +       ek+r ++a tr+gCka++++  +      gk++vt++  +Hn ela
  XP_028087091.1  64 DahgddmVEKRRAPKALTRVGCKAQFRIWYDLeageGGKYVVTHFIADHNNELA 117
                     0445555788999*************986543335599************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVPAKVKSEG VDYDIPNEAD DIHLINESQA ERCHGCEAGP RNKEATNINV EDGRIEVKQE  60
MVDDAHGDDM VEKRRAPKAL TRVGCKAQFR IWYDLEAGEG GKYVVTHFIA DHNNELAEQH  120
CVMYLRSHRD LNSVDKAQVM AMRNVGVKTS QIMDYMVNQS GCYENVGFIC TDLHNHIQAK  180
RRAEVEDGDA QGALEDSKSR ADYAKFGDVL IFDSTYHTHV YKKPFVMLAG VPNHFITTIF  240
ACVLLANGTI DVYTLVLETF MEAMDNSTCV RIDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-28FAR1 family protein