PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028086886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25727.5 Da PI: 6.7966 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r r++lg+f+t eAa a++ a+++l+g XP_028086886.1 46 TYKGVRQRT-WGKWVAEIREP---N-RgSRVWLGTFDTSLEAAMAYDSAARRLYG 95 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MLKSVVNLRE KKQQQQKNQV VKKPDRATSR KGCMRGKGGP ENASCTYKGV RQRTWGKWVA 60 EIREPNRGSR VWLGTFDTSL EAAMAYDSAA RRLYGPGANL NLPELYAATT RFSISGTNIP 120 INPHQESSDL SSAGSSESHL SGLTDESVST VAATSFPGGD MGVESRNKRR VGREERGDDG 180 FWGNLNAELP EFDDSAMWAE ATATMDFQVM AGPGTSVGDF EDGKGWEAIQ YPSWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-47 | ERF family protein |