PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086753.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 350aa MW: 39333.4 Da PI: 7.9942

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.3e-24	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e XP_028086753.1 77 DPEPGRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRHRSRKPVE 120 79***************************************987 PP
2	QLQ	59.3	1.1e-20	10	41	2	33
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 +FTa+Q+q+L++Q+l++Ky+++++P+Pp+L+ XP_028086753.1 10 PFTATQWQELEQQALIFKYMVSGVPIPPHLIS 41 9*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MMMSARTKCP FTATQWQELE QQALIFKYMV SGVPIPPHLI STVKTSMESS SVMSSRFYPH 60 QPIGWGSFEM GYGRKVDPEP GRCRRTDGKK WRCSKEAHPD SKYCERHMHR GRHRSRKPVE 120 VITTTTTNSS SMPPTTNPNS AGAAATTTSI ISYSLSAESY PFLNPHSSSS SRPPGFFLSP 180 QSNTTHHLFS DSGSYSQAHK DYSYVHGVRD EVDSRAPFPE ASGTPLTTSS SNTAYSQLDF 240 HSLTGSGKSR EQQQQQQQQQ QKQHCFVLGS DFRSGKPMEV ERGEEKQKPF HHFFGEWQPK 300 SREYTSWLDI EEEEENQSSH GSFSTTQLSI SMPPSTQELF GSKSTFPTDG

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MMMSARTKCP FTATQWQELE QQALIFKYMV SGVPIPPHLI STVKTSMESS SVMSSRFYPH  60
QPIGWGSFEM GYGRKVDPEP GRCRRTDGKK WRCSKEAHPD SKYCERHMHR GRHRSRKPVE  120
VITTTTTNSS SMPPTTNPNS AGAAATTTSI ISYSLSAESY PFLNPHSSSS SRPPGFFLSP  180
QSNTTHHLFS DSGSYSQAHK DYSYVHGVRD EVDSRAPFPE ASGTPLTTSS SNTAYSQLDF  240
HSLTGSGKSR EQQQQQQQQQ QKQHCFVLGS DFRSGKPMEV ERGEEKQKPF HHFFGEWQPK  300
SREYTSWLDI EEEEENQSSH GSFSTTQLSI SMPPSTQELF GSKSTFPTDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-49	GRF family protein