PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086556.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 332aa MW: 37884.7 Da PI: 8.0646

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.5	7.7e-51	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+v+yLk+k+++++l++ ++i+evd+yk++Pw+Lp k+ +e+ewyfF++rd+ky++g r+nr++ sg+Wkatg+dk++ s+ XP_028086556.1 12 LPPGFRFHPSDEELIVHYLKNKATSSSLPA-SIIAEVDLYKCNPWELPGKALFGEEEWYFFTPRDRKYPNGVRPNRMAGSGFWKATGTDKPIPSS 105 79**************************.89***********7777899*********************************999 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ g+kk Lvfykgr p+g+ktdW+m+eyrl XP_028086556.1 106 cSGKTLGVKKALVFYKGRPPRGVKTDWIMNEYRL 139 88999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEKKFISDII QLPPGFRFHP SDEELIVHYL KNKATSSSLP ASIIAEVDLY KCNPWELPGK 60 ALFGEEEWYF FTPRDRKYPN GVRPNRMAGS GFWKATGTDK PIPSSCSGKT LGVKKALVFY 120 KGRPPRGVKT DWIMNEYRLP EATMLTSRQK GCMRLDDWVL CRVRQKSNIS RKCGEDGCGP 180 NNEPFGYSQK GDKPCSNNTN ANLEMIRDFL YRDCLVLPLI FASQDLPSLD TVSSIPASFC 240 EDYSATNYSQ YSVPPFDNLN NGQKRKLSEG NQYDNSIQPK KKLTGRDNHW SDNIPVLNFC 300 STDQYEQGNN FNANQWNSII QYQELNNLTF ID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-80	NAC family protein