PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086417.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 522aa    MW: 59689.1 Da    PI: 9.0426
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.81.4e-1151455171374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL +cA+av++ d ++a++lL+r++++asp+gd ++Rla yf++AL+arla+++++ly+a+++++ s   +++ l+ +++f +++P+ k+s+
  XP_028086417.1 145 LRTLLSQCAQAVANADIRNANELLNRIRQHASPTGDGTERLAYYFANALEARLAGTGTSLYAAFKTKRIS---VADILKGYQVFMKACPFNKMSN 236
                     5789************************************************************999999...********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     + aN+ I   v+ ++++HiiDf++ +G+QWp+L+q ++ R++gpp +lR Tg++ p++g   ke++eetg+rLa ++++++vpfe+++ +ak+++
  XP_028086417.1 237 MFANKSIAALVHAKQTLHIIDFGVLYGFQWPCLIQHFSVREGGPPkKLRFTGIDFPQPGfrPKERVEETGRRLAIYCKRFNVPFEYTA-IAKKWS 330
                     *****************************************888889***********9*****************************.7***** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     ++eleeL+++++E+l+Vn+ ++l +++de+v  +s+rd+vL+lvk+++P+++++   +  +n++ F++rf eal ++sa fd +e++lpre++ r
  XP_028086417.1 331 TIELEELNIDRDEVLVVNCLYRLRNVPDETVVESSPRDAVLNLVKRINPDMFIHGVINGTYNAPFFVTRFREALFHFSAGFDVFETTLPREDQGR 425
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E+e+lgr+++nv+aceg+er+er et+++W+ r ++aGF++++l+++ ++++k+ ++ ++++ + v+e+ ++l++gWk+r ++++S+W+
  XP_028086417.1 426 MLYEKEILGRDVMNVIACEGTERVERPETYKQWQVRNTRAGFRQLQLNKELVTEVKTKVKLYYNENFVVDEDGKWLLQGWKGRIMFALSCWK 517
                     ***************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MTQTETETES NSQLRKCRER ERIRNCERME ILEKRKWSGV AGLPPRERED LGNDGAGRSN  60
KQLASFAEEA DDQLYDKVLL CPRLNPHLHQ DEPLHFLCTE HDDDDASSIV AGRKSPQNGV  120
AAKGANGGGR GRGKKQGNKK EVIDLRTLLS QCAQAVANAD IRNANELLNR IRQHASPTGD  180
GTERLAYYFA NALEARLAGT GTSLYAAFKT KRISVADILK GYQVFMKACP FNKMSNMFAN  240
KSIAALVHAK QTLHIIDFGV LYGFQWPCLI QHFSVREGGP PKKLRFTGID FPQPGFRPKE  300
RVEETGRRLA IYCKRFNVPF EYTAIAKKWS TIELEELNID RDEVLVVNCL YRLRNVPDET  360
VVESSPRDAV LNLVKRINPD MFIHGVINGT YNAPFFVTRF REALFHFSAG FDVFETTLPR  420
EDQGRMLYEK EILGRDVMNV IACEGTERVE RPETYKQWQV RNTRAGFRQL QLNKELVTEV  480
KTKVKLYYNE NFVVDEDGKW LLQGWKGRIM FALSCWKPVK ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-168GRAS family protein