PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028085812.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 164aa MW: 19354.2 Da PI: 10.6727 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.2 | 3.7e-07 | 98 | 136 | 1 | 38 |
AP2 1 sgykGV....rwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38 s+y+GV +++ +grW+ +I + g +k+ +lg++g XP_028085812.1 98 SKYRGVareqKQHHHNGRWETRIGRvF---G-NKYLYLGTYGN 136 79*****99999**********99966...3.6*********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MPPSPAMRCS PIREIKGDNH KKGRSLEGRI LLREKNDNHA LFNEMKTRER DSFLLQSNDD 60 FEHTFSMKLR YLSDYKLGMN QKTKRKTRKS SGFSRGVSKY RGVAREQKQH HHNGRWETRI 120 GRVFGNKYLY LGTYGNDFAL LGKALIFLFY KWLHVKDQQV PCVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 1e-22 | ERF family protein |