PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028085508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 355aa MW: 40449.9 Da PI: 4.7801 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.4 | 1.7e-29 | 128 | 188 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs+ed +++eitY+g+H++ XP_028085508.1 128 LDDGYCWRKYGQKDILGANFPRAYYRCTHRnaqGCLATKQVQRSDEDSSIFEITYRGRHTC 188 59***************************98899*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MEKLMTWEQE RLINELNQGR ELTKQLKNHL DPSASPESRE FLIQKILSCY ERSISMLNWG 60 ALVGELHKVD GTSETPQSQL AGHGSPMTDA SDKDFKDQCH RDVYKKRKTL PRWTQQVSVC 120 SGTGLGALDD GYCWRKYGQK DILGANFPRA YYRCTHRNAQ GCLATKQVQR SDEDSSIFEI 180 TYRGRHTCIQ TSQVTPSLAP IRKDCPKQNK YQPQPHQEEE NQSCEFETEK VKTAELGIVK 240 ENFPSFSFPS AETESENVET NIFPDSLKEK NFLASDSPAF VSPETSESDY FSMLPIQMEN 300 FEFFQNLRHS ESDLAEIMSA RTSVSNSPTI AADLDFPLGF DFDPNFTFDT SEFFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 3e-48 | WRKY family protein |