PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085461.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 317aa MW: 36536 Da PI: 4.9767

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.7e-09	259	293	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_028085461.1 259 RWPYPTEADKILLAESTGLDQKQINNWFINQRKRH 293 569*****************************885 PP
2	ELK	33.9	7e-12	213	234	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKY+ ++gsLk EFs XP_028085461.1 213 ELKDRLLRKYGNHIGSLKREFS 234 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDEMYGLLQT NNDYTDKVLM SPDNLMFPAD YQTFYSSSYG ADHHRIPYFG SEELMSAASA 60 ISEAASITPG VRRNHENHDD MSSFIKAKIA SHPFYPKLLQ AYIDCQKVGA PPEIACLLDE 120 IRRENDFCQR DSVITCLGAD PELDEFMETF CDVLVKYKSD LSRPFDEATT FLNKIEIQLG 180 NLCKDEGAVS SDEDFSGGEM EGHEAEMRGE DRELKDRLLR KYGNHIGSLK REFSKKKKKG 240 KLPKEARHTL LEWWNLHYRW PYPTEADKIL LAESTGLDQK QINNWFINQR KRHWKPSENM 300 QLAVMDNLSS GQFFTDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-126	TALE family protein