PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028085372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26390.4 Da PI: 4.8108 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.4e-17 | 98 | 147 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+++AeIrd + ng r++lg+f+tae Aa a+++a+ +++g XP_028085372.1 98 YRGVRKRL-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 147 9****887.**********44465..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MDSPFFPYPY PEFSPQSSFT SLESSSCNNV LGFTNQTTLP FNENDSEEML LFGVITEADS 60 DHSLMGTSSS RSRDKEACSE PREELINESL SASTSNAYRG VRKRLWGKYA AEIRDSTRNG 120 VRVWLGTFDT AEAAALAYDQ AAFAMRGSSA VLNFPVEVVY ESLLTMHYGF EEGCSPVLAL 180 KKRHSMKRKR VGRKKKEREN NQTRVENVVV LEDLGADYLE ELLSLSESTT TSVGTW |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 181 | 196 | KKRHSMKRKRVGRKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-48 | ERF family protein |