PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028085106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24003.7 Da PI: 5.6549 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.3e-18 | 27 | 77 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p + +r++lg++ t+e Aa+a++aa ++l+g XP_028085106.1 27 KKYKGVRMRS-WGSWVSEIRAP-----HqkTRIWLGSYSTPEAAARAYDAALLCLKG 77 59*****998.**********7.....335************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVIKSEPKIQ PEPNKAIPST STSLKKKKYK GVRMRSWGSW VSEIRAPHQK TRIWLGSYST 60 PEAAARAYDA ALLCLKGSSA NLNFPISSSS SSHHHLPPPD TILSPKSIQR IAAAAANGFN 120 DNNPTTTPPP PPPPSSTSSS SPSSPSDDMS FVSSSSSLDA YTPYDESDEP MSLITSSSWY 180 NFDSPKYTDM LINGTFFDPP MIEFEDVYEE GDIRLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G44830.1 | 7e-31 | ERF family protein |