PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 331aa MW: 36759 Da PI: 8.6491 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 162 | 213 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ +++g+ XP_028084674.1 162 HYRGVRRRP-WGKFAAEIRD----SaRHgARVWLGTFETAEEAALAYDRAAFRMRGA 213 8********.**********....33236**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MVPYSQILDQ LPLNENDSQD MVLCEVLNEA NALSTTITTT TTTTLTTTTP LFHHPRNHQT 60 NNNNIIAHNL FIDPNRAIAK KHYRGVRRRP WGKFAAEIRD SARHGLVLCE VLNEANALST 120 TTTTITTTTP LFHHPRNHQT NNNNIIAHNL FIDPNRAIAK KHYRGVRRRP WGKFAAEIRD 180 SARHGARVWL GTFETAEEAA LAYDRAAFRM RGAKALLNFP AEVVMAMSSS SSSSSSLQRF 240 NKSLKSLERH NSIASSGSCE DDSIGMSQSS VQRFEANLNL SLRSLDQHVS NSRIGSCDEI 300 STGMSQSESE VTTVGSHDSG SDYVENLLRV S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 1e-25 | ERF family protein |