PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084507.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 295aa MW: 33160.7 Da PI: 6.291

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	122	141	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_028084507.1 122 FSCSVCNKTFNRYNNMQMHM 141 89*****************9 PP
2	zf-C2H2	13.9	0.00016	207	229	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ XP_028084507.1 207 FGCRKCGKPFAVRGDWRTHEKNC 229 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MSFPHISSSE SACLEADEED EESTLLSLCP PGQHRHLSKP SSNNYLSYSS IQQPQSFQNT 60 TTATHQDDVD DDDDDDVTIA LHIGPSSSSS NPNSSSRNMV VLAEGQYWIP TPAQILVGPT 120 QFSCSVCNKT FNRYNNMQMH MWGHGSQYRK GPESLRGTKP ASSMLRLPCY CCAEGCRNNI 180 DHPRSKPLKD FRTLQTHYKR KHGTKPFGCR KCGKPFAVRG DWRTHEKNCG KLWFCICGSD 240 FKHKRSLKDH VRAFGDGHAP HSEDFLLCEV CDEEENDQDD DEEEHGNVGL GSVLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-110	C2H2 family protein