PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084429.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 365aa MW: 41091.1 Da PI: 6.6836

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	71	124	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_028084429.1 71 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 124 9****************************************************7 PP
2	Myb_DNA-binding	51.4	2.5e-16	72	123	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_028084429.1 72 RLRWTPDLHLCFVHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 123 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MKRSDSAEEH SKTISSNKNE DEDEDEGEEV DDDDDESKPK NRSSSSNSTV EGNEKKTPSG 60 SVRQYVRSKN PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ 120 MYRSKKIDDP DQGQGIQFDG RDHHVYNLSQ LPMLQSFNQN ASSSLRYGDA SWSTGHPKIH 180 NQIYSMGGSA SNGARRGPYS STAEKIFGSI DRNISPNYNF HIRNSFNGLQ ATMKTHESQE 240 HQLQPLQTHG SWQTQIRLMN QLQSSEKIFL SLEKNQNVMT SEEQSAAKRK VPDADCNNLD 300 LNLSLRVTQK NDEFGKGLED DQEVDSSLSL SLFSSSSSSK KHRRLEDSDG TRKHEITSST 360 LDLTL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MKRSDSAEEH SKTISSNKNE DEDEDEGEEV DDDDDESKPK NRSSSSNSTV EGNEKKTPSG  60
SVRQYVRSKN PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ  120
MYRSKKIDDP DQGQGIQFDG RDHHVYNLSQ LPMLQSFNQN ASSSLRYGDA SWSTGHPKIH  180
NQIYSMGGSA SNGARRGPYS STAEKIFGSI DRNISPNYNF HIRNSFNGLQ ATMKTHESQE  240
HQLQPLQTHG SWQTQIRLMN QLQSSEKIFL SLEKNQNVMT SEEQSAAKRK VPDADCNNLD  300
LNLSLRVTQK NDEFGKGLED DQEVDSSLSL SLFSSSSSSK KHRRLEDSDG TRKHEITSST  360
LDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	2e-52	G2-like family protein