PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 292aa MW: 32173 Da PI: 7.5767 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.5e-10 | 160 | 207 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_028084304.1 160 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 207 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MDPPIINEAS FSAANPSSYS LAEIWPFPIN GELSRGGGGL GLRMCNFGAF AEANSNRDVS 60 VDESTVTEQS GGGRKRRDAN SEEDESSKLV STSSAKDLKN SNGKRMKISR SRDENGGSKS 120 EVEANSGLEN KPAEQSTKPS EPPKQDYIHV RARRGQATDS HSLAERARRE KISERMKVLQ 180 DLVPGCNKVI GKALVLDEII NYIQSLQHQV EFLSMKLEAV NSRMNSPIEG FPSKDLLDLI 240 QNTLLASEKS RFTRLESPIF TNSHTLIVNP KFTNKVGSSS SFFFFWSPID SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 5e-80 | bHLH family protein |