PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084298.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 419aa MW: 47924.1 Da PI: 7.1122

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.2	2.6e-12	36	111	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +p +f+ ++ +++++ + + +s W+vk+ ++ +r + ++GW +F+k ++L++gDf+vF+++g++ f v++f++ XP_028084298.1 36 YFLIPVSFF-KYLNNENC--EHAVLRTSCGMWQVKI--EGD-QR-FEGAGWTDFAKRHDLQVGDFLVFRHEGDMVF--DVMAFDQ 111 4789**9.78666555..56666778899*..444.45.599********************999999..7877775 PP
2	B3	63.3	3.9e-20	185	276	3	96
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + +++++++ +rl +p+ fa++ g++ ++ +++++d ++ +sW+v+l k++g++++++GW+eF angLk+gD++ F+l+ +++++v+++ XP_028084298.1 185 VTILKPYSFEASRLFIPRGFARSEGLIDRRC-EMIIRDeQQQKSWQVRL-SHKCDGQVYIGRGWREFRIANGLKQGDTLSFELIC-KGTKPVIGF 276 4555899999************9997765.8888994666***.5888889************************99.788888875 PP
3	B3	57.1	3.3e-18	310	399	4	92
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE.. CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr..sefel 92 ++++++++k + l++pk+fa+ +g++k + ++t++d + r+W ++++ +k+++r y+ ++GWkeF+ an+Lk gD++ + l + ++ ++ XP_028084298.1 310 ATLTPHNFKCSELYIPKEFARLNGISKYS--EMTIKDGKQREWVMNMRRQKCGKRlYIGQQGWKEFAAANHLKNGDVIKLGLLKAgkKTLTM 399 345888999999******999998765..79999*******8888888888888*****************9977541244444 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MLTDNLKQEI PFQTIMSLHH IKFEDDIGSI SMLNIYFLIP VSFFKYLNNE NCEHAVLRTS 60 CGMWQVKIEG DQRFEGAGWT DFAKRHDLQV GDFLVFRHEG DMVFDVMAFD QSACEREYQP 120 LDVDDDDEED EDEDEDKDDE ESSESESSKD ISQSNKIFNN SPKASHPKGG GGGASCSKPS 180 HPYFVTILKP YSFEASRLFI PRGFARSEGL IDRRCEMIIR DEQQQKSWQV RLSHKCDGQV 240 YIGRGWREFR IANGLKQGDT LSFELICKGT KPVIGFHWLK GNSRANEMVN AKMEKSSTNT 300 KLTTPQYFIA TLTPHNFKCS ELYIPKEFAR LNGISKYSEM TIKDGKQREW VMNMRRQKCG 360 KRLYIGQQGW KEFAAANHLK NGDVIKLGLL KAGKKTLTMN FTFFGGSSRT KGLHNGSNN

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MLTDNLKQEI PFQTIMSLHH IKFEDDIGSI SMLNIYFLIP VSFFKYLNNE NCEHAVLRTS  60
CGMWQVKIEG DQRFEGAGWT DFAKRHDLQV GDFLVFRHEG DMVFDVMAFD QSACEREYQP  120
LDVDDDDEED EDEDEDKDDE ESSESESSKD ISQSNKIFNN SPKASHPKGG GGGASCSKPS  180
HPYFVTILKP YSFEASRLFI PRGFARSEGL IDRRCEMIIR DEQQQKSWQV RLSHKCDGQV  240
YIGRGWREFR IANGLKQGDT LSFELICKGT KPVIGFHWLK GNSRANEMVN AKMEKSSTNT  300
KLTTPQYFIA TLTPHNFKCS ELYIPKEFAR LNGISKYSEM TIKDGKQREW VMNMRRQKCG  360
KRLYIGQQGW KEFAAANHLK NGDVIKLGLL KAGKKTLTMN FTFFGGSSRT KGLHNGSNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	1e-37	B3 family protein