PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084296.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 420aa MW: 48052.3 Da PI: 7.3136

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.6	1.9e-12	36	112	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l +p +f+ ++ +++++ + + +s W+vk+ ++ +r + ++GW +F+k ++L++gDf+vF+++g++ f v++f++ XP_028084296.1 36 YFLKIPVSFF-KYLNNENC--EHAVLRTSCGMWQVKI--EGD-QR-FEGAGWTDFAKRHDLQVGDFLVFRHEGDMVF--DVMAFDQ 112 5689****.78666555..56666778899*..444.45.599********************999999..7877775 PP
2	B3	63.3	3.9e-20	186	277	3	96
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + +++++++ +rl +p+ fa++ g++ ++ +++++d ++ +sW+v+l k++g++++++GW+eF angLk+gD++ F+l+ +++++v+++ XP_028084296.1 186 VTILKPYSFEASRLFIPRGFARSEGLIDRRC-EMIIRDeQQQKSWQVRL-SHKCDGQVYIGRGWREFRIANGLKQGDTLSFELIC-KGTKPVIGF 277 4555899999************9997765.8888994666***.5888889************************99.788888875 PP
3	B3	57.1	3.3e-18	311	400	4	92
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE.. CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr..sefel 92 ++++++++k + l++pk+fa+ +g++k + ++t++d + r+W ++++ +k+++r y+ ++GWkeF+ an+Lk gD++ + l + ++ ++ XP_028084296.1 311 ATLTPHNFKCSELYIPKEFARLNGISKYS--EMTIKDGKQREWVMNMRRQKCGKRlYIGQQGWKEFAAANHLKNGDVIKLGLLKAgkKTLTM 400 345888999999******999998765..79999*******8888888888888*****************9977541244444 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MLTDNLKQEI PFQTIMSLHH IKFEDDIGSI SMLNIYFLKI PVSFFKYLNN ENCEHAVLRT 60 SCGMWQVKIE GDQRFEGAGW TDFAKRHDLQ VGDFLVFRHE GDMVFDVMAF DQSACEREYQ 120 PLDVDDDDEE DEDEDEDKDD EESSESESSK DISQSNKIFN NSPKASHPKG GGGGASCSKP 180 SHPYFVTILK PYSFEASRLF IPRGFARSEG LIDRRCEMII RDEQQQKSWQ VRLSHKCDGQ 240 VYIGRGWREF RIANGLKQGD TLSFELICKG TKPVIGFHWL KGNSRANEMV NAKMEKSSTN 300 TKLTTPQYFI ATLTPHNFKC SELYIPKEFA RLNGISKYSE MTIKDGKQRE WVMNMRRQKC 360 GKRLYIGQQG WKEFAAANHL KNGDVIKLGL LKAGKKTLTM NFTFFGGSSR TKGLHNGSNN

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MLTDNLKQEI PFQTIMSLHH IKFEDDIGSI SMLNIYFLKI PVSFFKYLNN ENCEHAVLRT  60
SCGMWQVKIE GDQRFEGAGW TDFAKRHDLQ VGDFLVFRHE GDMVFDVMAF DQSACEREYQ  120
PLDVDDDDEE DEDEDEDKDD EESSESESSK DISQSNKIFN NSPKASHPKG GGGGASCSKP  180
SHPYFVTILK PYSFEASRLF IPRGFARSEG LIDRRCEMII RDEQQQKSWQ VRLSHKCDGQ  240
VYIGRGWREF RIANGLKQGD TLSFELICKG TKPVIGFHWL KGNSRANEMV NAKMEKSSTN  300
TKLTTPQYFI ATLTPHNFKC SELYIPKEFA RLNGISKYSE MTIKDGKQRE WVMNMRRQKC  360
GKRLYIGQQG WKEFAAANHL KNGDVIKLGL LKAGKKTLTM NFTFFGGSSR TKGLHNGSNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	3e-38	B3 family protein