PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084293.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 346aa MW: 39911.2 Da PI: 4.2071

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.8	2.9e-25	7	131	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 G++F Ptd+elv +yL++k++g++l++e ++e+++y+ ++L k k+++++k +y+F++ +kk+ +gkr r++ +g+Wk + k++++ XP_028084293.1 7 IGYKFIPTDKELVLHYLRAKAKGQPLPVEGLVNECNLYDD--QELSKifsKMRTRSKLYYYFTELKKKNGKGKRIDRMVGKGTWKGLDRGKPIHD 99 7*************************99999975..56653334788888888******************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+l+g k+++ + + ++++e++ W m+ey+l XP_028084293.1 100 NDGRLTGRKRSFDYIN--RESSEHSVWDMKEYSL 131 ***********4..444469******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAAKIAIGYK FIPTDKELVL HYLRAKAKGQ PLPVEGLVNE CNLYDDQELS KIFSKMRTRS 60 KLYYYFTELK KKNGKGKRID RMVGKGTWKG LDRGKPIHDN DGRLTGRKRS FDYINRESSE 120 HSVWDMKEYS LEGVSLEDDQ LIKDKNYVLC AIKMKRRRAE IEQQEQPVDD FDIDHYSVED 180 DQPTPIIQQE EQPTATVIQQ EEQPTAAVIQ QELAPPDDDD HFDWDQFVWD STLAATTVIQ 240 QEEQPTVAFM QQEQAQADDN GHFDWDQFVW DSTLAATPVI QQEEQPTAAV IQQEQAQADD 300 GGHFDWDQFV WDSTLAATPV IQQLDVADDD LFDLDQFDWN STLPSL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAAKIAIGYK FIPTDKELVL HYLRAKAKGQ PLPVEGLVNE CNLYDDQELS KIFSKMRTRS  60
KLYYYFTELK KKNGKGKRID RMVGKGTWKG LDRGKPIHDN DGRLTGRKRS FDYINRESSE  120
HSVWDMKEYS LEGVSLEDDQ LIKDKNYVLC AIKMKRRRAE IEQQEQPVDD FDIDHYSVED  180
DQPTPIIQQE EQPTATVIQQ EEQPTAAVIQ QELAPPDDDD HFDWDQFVWD STLAATTVIQ  240
QEEQPTVAFM QQEQAQADDN GHFDWDQFVW DSTLAATPVI QQEEQPTAAV IQQEQAQADD  300
GGHFDWDQFV WDSTLAATPV IQQLDVADDD LFDLDQFDWN STLPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	6e-20	NAC family protein