PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 28076.9 Da PI: 4.8179 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 72 | 122 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g XP_028084098.1 72 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 122 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MTEWVGSRNM STEPPHNSEP ETSSNSFSSS PSSSPSSPGL TQSLSNPQQP ENNPLPANQK 60 PKRIRESSSK HPVYRGVRMR NWGKWVSEIR EPRKKSRIWL GTFPTPEMAA RAHDVAALSI 120 KGGSAVLNFP HLAGSLPRPA SLLPRDVQAA AAKAAAMVKF DSPSSSSSSS SVSVFTNSDE 180 LSQIVELPSL GTNYDESTEL NSSEFVYVDS VDEWMYTPPW LDFADDGGGG YFSDEIPAPP 240 ETLTSTSFDS FLWNYQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-61 | ERF family protein |