PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084091.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARF

Protein Properties

Length: 689aa MW: 76141 Da PI: 7.1157

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.4e-23	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_028084091.1 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR--AD 213 89**************************986445444..8999*****************************************3..47 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_028084091.1 214 NGDLCVGIRRA 224 7888**996 PP
2	Auxin_resp	115.9	3.4e-38	293	375	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++++FevvY+Pr+s++eF+vk+++v++a+++++++GmRfkmafetedss++++ +Gt+++v+ dp+rWpnS+Wr+L+ XP_028084091.1 293 TALAANGQPFEVVYYPRSSAPEFCVKASSVRTAMRIQWCPGMRFKMAFETEDSSRISWfMGTISSVQVDDPIRWPNSPWRLLQ 375 56789****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MITVMNSIHK SMNESEECLD SQLWHACAGG MVQMPPVNSK VFYFPQGHAE HAHEKLDSGN 60 FSRIPALVLC RVSGIKFLAD TDTDEVYAKI RLVPLRNNDS DFDHDDGFLG IDKSENKEKP 120 SSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG EIWKFRHIYR 180 GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RADNGDLCVG IRRAKRGIGD GPESPSGWNT 240 VGGNCASPYG GYSAFLREDE NKFMRNGNGG SANSNGVLMG NGKVRAESVI EATALAANGQ 300 PFEVVYYPRS SAPEFCVKAS SVRTAMRIQW CPGMRFKMAF ETEDSSRISW FMGTISSVQV 360 DDPIRWPNSP WRLLQVAWDE PDLLQNVTRV SPWLVELVSN MPAIHFSPFT PPRKKLRVPQ 420 PPDFPFIGQL PMPSFPSNPL RPSSPLCCIS DNIPAGIQGA RHAHFGLSSA DLHFNKLHSG 480 LFPLGSQRLD YAVQPPRVPI GNLTDNPKDN KNLSCLLTMG ISTQNSKKDN ETKTPMFLLF 540 GQPILTEQQI SQSCSSDENP EKTPNFSDGS GSAVLQNGPP ESLSDDGSPW YKDHQKSEFG 600 LETGHCKVFM ESEDVGRTLD LSALGSYEEL YRNLANLLGI ERSGMLSHVL YRDAAGAIKH 660 TGDKPFSEFS KTAKRLTILM DSGKRNMGR

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MITVMNSIHK SMNESEECLD SQLWHACAGG MVQMPPVNSK VFYFPQGHAE HAHEKLDSGN  60
FSRIPALVLC RVSGIKFLAD TDTDEVYAKI RLVPLRNNDS DFDHDDGFLG IDKSENKEKP  120
SSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG EIWKFRHIYR  180
GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RADNGDLCVG IRRAKRGIGD GPESPSGWNT  240
VGGNCASPYG GYSAFLREDE NKFMRNGNGG SANSNGVLMG NGKVRAESVI EATALAANGQ  300
PFEVVYYPRS SAPEFCVKAS SVRTAMRIQW CPGMRFKMAF ETEDSSRISW FMGTISSVQV  360
DDPIRWPNSP WRLLQVAWDE PDLLQNVTRV SPWLVELVSN MPAIHFSPFT PPRKKLRVPQ  420
PPDFPFIGQL PMPSFPSNPL RPSSPLCCIS DNIPAGIQGA RHAHFGLSSA DLHFNKLHSG  480
LFPLGSQRLD YAVQPPRVPI GNLTDNPKDN KNLSCLLTMG ISTQNSKKDN ETKTPMFLLF  540
GQPILTEQQI SQSCSSDENP EKTPNFSDGS GSAVLQNGPP ESLSDDGSPW YKDHQKSEFG  600
LETGHCKVFM ESEDVGRTLD LSALGSYEEL YRNLANLLGI ERSGMLSHVL YRDAAGAIKH  660
TGDKPFSEFS KTAKRLTILM DSGKRNMGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein