PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083731.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 274aa    MW: 29873.9 Da    PI: 6.7501
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.85.4e-31127183158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RR++Rak+e  +kl +k rkpylheSRh hA+rR RgsgGrF
  XP_028083731.1 127 EEPVYVNAKQYHGILRRRESRAKAELARKL-IKVRKPYLHESRHMHAIRRVRGSGGRF 183
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MIGGNTSNSS SVEQSKDGES QSDDGLDEED DAIKESQITS PHSDGNYGQG HQNFQNRTSA  60
IRPMINESLT QPHQLELVGH SIACASNPYL DPYYAGMMAT YGPQPWVPPH LLDMHHARMP  120
LPLEMVEEPV YVNAKQYHGI LRRRESRAKA ELARKLIKVR KPYLHESRHM HAIRRVRGSG  180
GRFVKKSDAE ASKCTAEETG IGSASATSSH SASSSGSEPL RCEAAETQDS HQEEKGSVGH  240
GTCEPRGYAN DGDSSIQQCG SISSKKASQR SLAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.15e-55NF-YA family protein