PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083637.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 684aa MW: 76412.4 Da PI: 4.6066

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	490	536	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_028083637.1 490 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYVKQLR 536 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MEAPPSSRLQ SMLQTAVQTV QWTYSLFWQL CPDQQGMLVW GEGYYNGAIK TRKTVQPMEV 60 SSEEASLQRS QQLMELYESL SAGESNQQTR RPCASLSPED LTELEWFYLM CVSFSFPPGV 120 GLPGKAYAKR QHIWLTGANE VDSKVFTRAI LAKSAHIQTV VCIPLLDGVV ELGTTETVQE 180 DIGFIQQVKS FFSDHHPPQP PKPAVSEQST SNPAASSGHP RFDSPPVPLP AMYAPMDPLP 240 IANQIDNEED DDEEKEEEEE EEEEEDEEDQ DEEDSEADSG AHQNPHDLSP GLAEAEPVAV 300 EPSELMQVEM SEDIRVGSPD DGSNNLDWEF RVLAVSQAGN PADNQRRAES TRRWQVLQDR 360 LNNGLQLPPP SGGPALEELA QEDTHYSQTV STVLHHQPNR WSETSSSSMN PSYLLYSSQS 420 SFSKWTIHSS DQHHHHTAEA SSQWLLKYIL FNVPFLHTKS PDQNSPKSIN IADSTSRFPK 480 PTPQDDLSAN HVLAERRRRE KLNERFVILR SLVPFVTKMD KASILGDTIE YVKQLRKKIL 540 DLEARAREIE IDPEISDLNL KEPREKRKLR IVEVNGGGGK ATKAVDSESP PPPQAVVGVA 600 VQVQVSIIES DALVEMQCLH REGLLLEVMV VLRDLRLEVT AVQSSLANGV FVAELRAKVK 660 QNVSGKKPSI VEVKRAMHQI IPQN

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MEAPPSSRLQ SMLQTAVQTV QWTYSLFWQL CPDQQGMLVW GEGYYNGAIK TRKTVQPMEV  60
SSEEASLQRS QQLMELYESL SAGESNQQTR RPCASLSPED LTELEWFYLM CVSFSFPPGV  120
GLPGKAYAKR QHIWLTGANE VDSKVFTRAI LAKSAHIQTV VCIPLLDGVV ELGTTETVQE  180
DIGFIQQVKS FFSDHHPPQP PKPAVSEQST SNPAASSGHP RFDSPPVPLP AMYAPMDPLP  240
IANQIDNEED DDEEKEEEEE EEEEEDEEDQ DEEDSEADSG AHQNPHDLSP GLAEAEPVAV  300
EPSELMQVEM SEDIRVGSPD DGSNNLDWEF RVLAVSQAGN PADNQRRAES TRRWQVLQDR  360
LNNGLQLPPP SGGPALEELA QEDTHYSQTV STVLHHQPNR WSETSSSSMN PSYLLYSSQS  420
SFSKWTIHSS DQHHHHTAEA SSQWLLKYIL FNVPFLHTKS PDQNSPKSIN IADSTSRFPK  480
PTPQDDLSAN HVLAERRRRE KLNERFVILR SLVPFVTKMD KASILGDTIE YVKQLRKKIL  540
DLEARAREIE IDPEISDLNL KEPREKRKLR IVEVNGGGGK ATKAVDSESP PPPQAVVGVA  600
VQVQVSIIES DALVEMQCLH REGLLLEVMV VLRDLRLEVT AVQSSLANGV FVAELRAKVK  660
QNVSGKKPSI VEVKRAMHQI IPQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	495	500	ERRRRE
2	496	501	RRRREK
3	564	570	REKRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-100	bHLH family protein